selene_sdk.utils
====================

.. automodule:: selene_sdk.utils
.. currentmodule:: selene_sdk.utils

NonStrandSpecific
-----------------
.. autoclass:: NonStrandSpecific
   :members:
   :show-inheritance:

PerformanceMetrics
--------------------
.. autoclass:: PerformanceMetrics
    :members:
    :show-inheritance:
.. autofunction:: visualize_roc_curves
.. autofunction:: visualize_precision_recall_curves

initialize_logger
-------------------
.. autofunction:: initialize_logger

load_features_list
-------------------
.. autofunction:: load_features_list

load_model_from_state_dict
--------------------------
.. autofunction:: load_model_from_state_dict

get_indices_and_probabilities
-----------------------------
.. autofunction:: get_indices_and_probabilities

load_path (for config.yml)
---------------------------
.. autofunction:: load_path

instantiate (configuration object)
----------------------------------
.. autofunction:: instantiate

initialize_model
----------------
.. autofunction:: initialize_model

parse_configs_and_run
----------------------
.. autofunction:: parse_configs_and_run

execute (run Selene operations)
-------------------------------
.. autofunction:: execute